Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEP78395 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 LAGE3P1-201ENST00000425356 484 ntBASIC17.03■□□□□ 0.32
PRAMEP78395 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.03■□□□□ 0.32
PRAMEP78395 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEP78395 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 AC006557.2-201ENST00000592985 1240 ntBASIC17.03■□□□□ 0.32
PRAMEP78395 TERC-201ENST00000602385 541 ntBASIC17.03■□□□□ 0.32
PRAMEP78395 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 PCDHA14-201ENST00000506751 2298 ntBASIC17.03■□□□□ 0.32
PRAMEP78395 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEP78395 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEP78395 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEP78395 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEP78395 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.02■□□□□ 0.32
PRAMEP78395 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEP78395 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.02■□□□□ 0.32
PRAMEP78395 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.02■□□□□ 0.32
PRAMEP78395 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEP78395 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.02■□□□□ 0.32
PRAMEP78395 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PRAMEP78395 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRAMEP78395 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEP78395 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.02■□□□□ 0.31
PRAMEP78395 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.02■□□□□ 0.31
PRAMEP78395 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRAMEP78395 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEP78395 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEP78395 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEP78395 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEP78395 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEP78395 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PRAMEP78395 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRAMEP78395 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEP78395 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEP78395 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 DUSP5P1-201ENST00000441325 1139 ntBASIC17.01■□□□□ 0.31
PRAMEP78395 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 DUX4L17-201ENST00000557360 1267 ntBASIC17.01■□□□□ 0.31
PRAMEP78395 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PRAMEP78395 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.01■□□□□ 0.31
PRAMEP78395 AC107918.4-202ENST00000641623 219 ntBASIC17.01■□□□□ 0.31
PRAMEP78395 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PRAMEP78395 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEP78395 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.01■□□□□ 0.31
PRAMEP78395 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEP78395 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEP78395 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17■□□□□ 0.31
PRAMEP78395 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms