Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS4XP62701 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS4XP62701 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS4XP62701 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.21■□□□□ 0.03
RPS4XP62701 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS4XP62701 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RPS4XP62701 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS4XP62701 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RPS4XP62701 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4XP62701 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.21■□□□□ 0.02
RPS4XP62701 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.21■□□□□ 0.02
RPS4XP62701 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
RPS4XP62701 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
RPS4XP62701 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
RPS4XP62701 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
RPS4XP62701 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPS4XP62701 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 AC018695.7-201ENST00000624587 2492 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 AC104109.2-201ENST00000602919 1418 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.2■□□□□ 0.02
RPS4XP62701 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 AC092910.1-201ENST00000482027 1129 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.2■□□□□ 0.02
RPS4XP62701 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 AC025062.2-201ENST00000605477 670 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 AC027601.4-201ENST00000611259 610 ntBASIC15.2■□□□□ 0.02
RPS4XP62701 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RPS4XP62701 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.2■□□□□ 0.02
RPS4XP62701 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPS4XP62701 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
RPS4XP62701 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4XP62701 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS4XP62701 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS4XP62701 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RPS4XP62701 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RPS4XP62701 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RPS4XP62701 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4XP62701 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.19■□□□□ 0.02
RPS4XP62701 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.19■□□□□ 0.02
RPS4XP62701 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RPS4XP62701 AC087163.2-201ENST00000457299 853 ntBASIC15.19■□□□□ 0.02
RPS4XP62701 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.19■□□□□ 0.02
RPS4XP62701 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
RPS4XP62701 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.19■□□□□ 0.02
RPS4XP62701 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms