Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS1BP61024 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS1BP61024 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.89□□□□□ -0.51
CKS1BP61024 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
CKS1BP61024 AL158047.1-201ENST00000445918 881 ntBASIC11.89□□□□□ -0.51
CKS1BP61024 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.89□□□□□ -0.51
CKS1BP61024 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.89□□□□□ -0.51
CKS1BP61024 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CKS1BP61024 AL023803.3-201ENST00000615559 522 ntBASIC11.89□□□□□ -0.51
CKS1BP61024 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
CKS1BP61024 ITM2C-210ENST00000620962 501 ntBASIC11.89□□□□□ -0.51
CKS1BP61024 AL049637.2-201ENST00000641778 930 ntBASIC11.89□□□□□ -0.51
CKS1BP61024 AC092865.7-201ENST00000641832 219 ntBASIC11.89□□□□□ -0.51
CKS1BP61024 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS1BP61024 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS1BP61024 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CKS1BP61024 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
CKS1BP61024 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 AC132938.6-201ENST00000623828 1655 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 ILF2-202ENST00000368681 726 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.88□□□□□ -0.51
CKS1BP61024 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CKS1BP61024 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.88□□□□□ -0.51
CKS1BP61024 AP003071.4-201ENST00000562276 1284 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 AL512604.3-201ENST00000569583 964 ntBASIC11.88□□□□□ -0.51
CKS1BP61024 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS1BP61024 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS1BP61024 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms