Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.73■□□□□ 0.75
RHBDL3P58872 HLA-H-201ENST00000383620 1096 ntBASIC19.73■□□□□ 0.75
RHBDL3P58872 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.73■□□□□ 0.75
RHBDL3P58872 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.73■□□□□ 0.75
RHBDL3P58872 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.73■□□□□ 0.75
RHBDL3P58872 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.73■□□□□ 0.75
RHBDL3P58872 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 SPDYE12P-201ENST00000618416 771 ntBASIC19.73■□□□□ 0.75
RHBDL3P58872 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDL3P58872 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.73■□□□□ 0.75
RHBDL3P58872 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RHBDL3P58872 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDL3P58872 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.73■□□□□ 0.75
RHBDL3P58872 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RHBDL3P58872 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 MRPS18AP1-201ENST00000414458 589 ntBASIC19.72■□□□□ 0.75
RHBDL3P58872 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.72■□□□□ 0.75
RHBDL3P58872 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 BANF1P1-201ENST00000553684 263 ntBASIC19.72■□□□□ 0.75
RHBDL3P58872 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
RHBDL3P58872 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.72■□□□□ 0.75
RHBDL3P58872 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.72■□□□□ 0.75
RHBDL3P58872 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 AC003101.2-201ENST00000612557 442 ntBASIC19.72■□□□□ 0.75
RHBDL3P58872 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RHBDL3P58872 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDL3P58872 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RHBDL3P58872 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.71■□□□□ 0.75
RHBDL3P58872 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RHBDL3P58872 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RHBDL3P58872 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.71■□□□□ 0.75
RHBDL3P58872 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.71■□□□□ 0.75
RHBDL3P58872 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RHBDL3P58872 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 AL590560.3-201ENST00000623350 461 ntBASIC19.71■□□□□ 0.75
RHBDL3P58872 AC073592.8-201ENST00000624126 511 ntBASIC19.71■□□□□ 0.75
RHBDL3P58872 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.71■□□□□ 0.75
RHBDL3P58872 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.71■□□□□ 0.75
RHBDL3P58872 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RHBDL3P58872 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RHBDL3P58872 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
RHBDL3P58872 AC100757.3-201ENST00000622361 1406 ntBASIC19.7■□□□□ 0.74
RHBDL3P58872 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RHBDL3P58872 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RHBDL3P58872 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms