Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CLRN1P58418 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.08■□□□□ 0
CLRN1P58418 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.08■□□□□ 0
CLRN1P58418 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLRN1P58418 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLRN1P58418 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLRN1P58418 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.07■□□□□ 0
CLRN1P58418 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 AC136632.2-201ENST00000512891 861 ntBASIC15.07■□□□□ 0
CLRN1P58418 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.07■□□□□ 0
CLRN1P58418 DUX4L17-201ENST00000557360 1267 ntBASIC15.07■□□□□ 0
CLRN1P58418 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.07■□□□□ 0
CLRN1P58418 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 AL391256.1-201ENST00000443260 1855 ntBASIC15.07■□□□□ 0
CLRN1P58418 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.07■□□□□ 0
CLRN1P58418 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
CLRN1P58418 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.07■□□□□ 0
CLRN1P58418 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLRN1P58418 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.07■□□□□ 0
CLRN1P58418 PCDHA14-201ENST00000506751 2298 ntBASIC15.06■□□□□ 0
CLRN1P58418 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.06■□□□□ 0
CLRN1P58418 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.06■□□□□ 0
CLRN1P58418 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CLRN1P58418 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 KRT18P67-201ENST00000432816 1264 ntBASIC15.06■□□□□ 0
CLRN1P58418 FAAHP1-202ENST00000446499 1238 ntBASIC15.06■□□□□ 0
CLRN1P58418 PAWRP1-201ENST00000451083 565 ntBASIC15.06■□□□□ 0
CLRN1P58418 AC087163.2-201ENST00000457299 853 ntBASIC15.06■□□□□ 0
CLRN1P58418 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.06■□□□□ 0
CLRN1P58418 RPS15P9-201ENST00000494093 319 ntBASIC15.06■□□□□ 0
CLRN1P58418 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.06■□□□□ 0
CLRN1P58418 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.06■□□□□ 0
CLRN1P58418 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLRN1P58418 AC008735.5-201ENST00000623544 497 ntBASIC15.06■□□□□ 0
CLRN1P58418 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.06■□□□□ 0
CLRN1P58418 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLRN1P58418 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms