Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CMC4P56277 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CMC4P56277 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CMC4P56277 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 AC002056.1-201ENST00000395613 760 ntBASIC12.53□□□□□ -0.4
CMC4P56277 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 HLA-J-202ENST00000469281 1241 ntBASIC12.53□□□□□ -0.4
CMC4P56277 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 AC112191.1-201ENST00000523689 701 ntBASIC12.53□□□□□ -0.4
CMC4P56277 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.53□□□□□ -0.4
CMC4P56277 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 ACTL9-202ENST00000612068 1252 ntBASIC12.53□□□□□ -0.4
CMC4P56277 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.53□□□□□ -0.4
CMC4P56277 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 AC139713.2-201ENST00000641328 2723 ntBASIC12.53□□□□□ -0.4
CMC4P56277 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.53□□□□□ -0.4
CMC4P56277 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.53□□□□□ -0.4
CMC4P56277 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CMC4P56277 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CMC4P56277 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.52□□□□□ -0.4
CMC4P56277 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.52□□□□□ -0.4
CMC4P56277 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CMC4P56277 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
CMC4P56277 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.52□□□□□ -0.41
CMC4P56277 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.52□□□□□ -0.41
CMC4P56277 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.52□□□□□ -0.41
CMC4P56277 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.52□□□□□ -0.41
CMC4P56277 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 ACTG1P14-201ENST00000446382 1122 ntBASIC12.52□□□□□ -0.41
CMC4P56277 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.52□□□□□ -0.41
CMC4P56277 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.52□□□□□ -0.41
CMC4P56277 MIR4492-201ENST00000581627 80 ntBASIC12.52□□□□□ -0.41
CMC4P56277 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.52□□□□□ -0.41
CMC4P56277 AC010507.1-201ENST00000633895 436 ntBASIC12.52□□□□□ -0.41
CMC4P56277 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CMC4P56277 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CMC4P56277 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.52□□□□□ -0.41
CMC4P56277 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 AC025580.3-201ENST00000617932 1424 ntBASIC12.52□□□□□ -0.41
CMC4P56277 AL645608.8-201ENST00000606034 2086 ntBASIC12.52□□□□□ -0.41
CMC4P56277 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CMC4P56277 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms