Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 AL135999.2-201ENST00000622438 1686 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX2-1P43699 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 FAM8A6P-201ENST00000407496 1135 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 AL596275.1-201ENST00000423464 877 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 HLA-F-220ENST00000434407 884 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 HLA-J-202ENST00000469281 1241 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.85□□□□□ -0.19
NKX2-1P43699 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NKX2-1P43699 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
NKX2-1P43699 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NKX2-1P43699 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.85□□□□□ -0.19
NKX2-1P43699 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 AC007326.2-201ENST00000624224 7579 ntBASIC13.85□□□□□ -0.19
NKX2-1P43699 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NKX2-1P43699 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.85□□□□□ -0.19
NKX2-1P43699 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.84□□□□□ -0.19
NKX2-1P43699 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 AC103564.2-201ENST00000432853 1299 ntBASIC13.84□□□□□ -0.19
NKX2-1P43699 AC007967.3-201ENST00000434308 558 ntBASIC13.84□□□□□ -0.19
NKX2-1P43699 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.84□□□□□ -0.19
NKX2-1P43699 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 ZNF444P1-201ENST00000559497 298 ntBASIC13.84□□□□□ -0.19
NKX2-1P43699 STK25P1-201ENST00000585406 838 ntBASIC13.84□□□□□ -0.19
NKX2-1P43699 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-1P43699 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-1P43699 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.84□□□□□ -0.19
NKX2-1P43699 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.84□□□□□ -0.19
NKX2-1P43699 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.84□□□□□ -0.19
NKX2-1P43699 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
NKX2-1P43699 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms