Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN7P35236 PI4KAP1-204ENST00000612579 1703 ntBASIC17.41■□□□□ 0.38
PTPN7P35236 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN7P35236 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PTPN7P35236 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN7P35236 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPN7P35236 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPN7P35236 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 AL031731.1-201ENST00000642131 2094 ntBASIC17.4■□□□□ 0.38
PTPN7P35236 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN7P35236 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN7P35236 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.4■□□□□ 0.38
PTPN7P35236 PRELID1P1-202ENST00000567272 903 ntBASIC17.4■□□□□ 0.38
PTPN7P35236 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 AC131009.4-201ENST00000624048 1740 ntBASIC17.4■□□□□ 0.38
PTPN7P35236 AL662844.4-201ENST00000606367 2838 ntBASIC17.4■□□□□ 0.38
PTPN7P35236 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PTPN7P35236 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTPN7P35236 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.4■□□□□ 0.38
PTPN7P35236 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPN7P35236 AL671710.1-201ENST00000610245 2349 ntBASIC17.39■□□□□ 0.38
PTPN7P35236 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN7P35236 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPN7P35236 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 SLC22A20-204ENST00000530038 1673 ntBASIC17.39■□□□□ 0.37
PTPN7P35236 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPN7P35236 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PTPN7P35236 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 PCDH8P1-201ENST00000428983 2773 ntBASIC17.39■□□□□ 0.37
PTPN7P35236 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPN7P35236 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN7P35236 AF238378.1-201ENST00000526806 358 ntBASIC17.39■□□□□ 0.37
PTPN7P35236 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPN7P35236 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN7P35236 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPN7P35236 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 AC092364.2-201ENST00000596710 2692 ntBASIC17.39■□□□□ 0.37
PTPN7P35236 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PTPN7P35236 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPN7P35236 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 AL353732.1-201ENST00000569618 1459 ntBASIC17.38■□□□□ 0.37
PTPN7P35236 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN7P35236 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 AC073621.1-201ENST00000392730 636 ntBASIC17.38■□□□□ 0.37
PTPN7P35236 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN7P35236 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPN7P35236 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPN7P35236 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPN7P35236 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTPN7P35236 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPN7P35236 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms