Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 MKNK2P1-201ENST00000437526 628 ntBASIC14.97□□□□□ -0.01
HOXC12P31275 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 AC004790.2-201ENST00000623588 572 ntBASIC14.97□□□□□ -0.01
HOXC12P31275 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HOXC12P31275 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HOXC12P31275 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HOXC12P31275 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC12P31275 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
HOXC12P31275 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 AL035633.1-201ENST00000406139 838 ntBASIC14.96□□□□□ -0.01
HOXC12P31275 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HOXC12P31275 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC12P31275 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.96□□□□□ -0.01
HOXC12P31275 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.96□□□□□ -0.01
HOXC12P31275 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.96□□□□□ -0.01
HOXC12P31275 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.96□□□□□ -0.01
HOXC12P31275 AC092865.6-201ENST00000642101 219 ntBASIC14.96□□□□□ -0.01
HOXC12P31275 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
HOXC12P31275 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HOXC12P31275 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HOXC12P31275 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.96□□□□□ -0.02
HOXC12P31275 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HOXC12P31275 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
HOXC12P31275 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.95□□□□□ -0.02
HOXC12P31275 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HOXC12P31275 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 AC244107.1-201ENST00000442033 332 ntBASIC14.95□□□□□ -0.02
HOXC12P31275 VN2R19P-201ENST00000442399 1052 ntBASIC14.95□□□□□ -0.02
HOXC12P31275 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.95□□□□□ -0.02
HOXC12P31275 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.95□□□□□ -0.02
HOXC12P31275 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.95□□□□□ -0.02
HOXC12P31275 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.95□□□□□ -0.02
HOXC12P31275 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.95□□□□□ -0.02
HOXC12P31275 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HOXC12P31275 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HOXC12P31275 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
HOXC12P31275 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms