Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
GDF1P27539 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
GDF1P27539 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 CNN2P11-201ENST00000429351 262 ntBASIC15.26■□□□□ 0.03
GDF1P27539 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.26■□□□□ 0.03
GDF1P27539 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.26■□□□□ 0.03
GDF1P27539 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
GDF1P27539 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
GDF1P27539 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GDF1P27539 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
GDF1P27539 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GDF1P27539 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.25■□□□□ 0.03
GDF1P27539 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GDF1P27539 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.25■□□□□ 0.03
GDF1P27539 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
GDF1P27539 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GDF1P27539 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GDF1P27539 AL121761.2-201ENST00000598007 1648 ntBASIC15.25■□□□□ 0.03
GDF1P27539 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.24■□□□□ 0.03
GDF1P27539 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GDF1P27539 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GDF1P27539 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.24■□□□□ 0.03
GDF1P27539 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.24■□□□□ 0.03
GDF1P27539 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GDF1P27539 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms