Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.34■□□□□ 0.69
SCG2P13521 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 HLA-J-202ENST00000469281 1241 ntBASIC19.34■□□□□ 0.69
SCG2P13521 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.34■□□□□ 0.69
SCG2P13521 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.34■□□□□ 0.69
SCG2P13521 AC006538.1-201ENST00000567905 1585 ntBASIC19.34■□□□□ 0.69
SCG2P13521 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SCG2P13521 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCG2P13521 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.34■□□□□ 0.69
SCG2P13521 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.34■□□□□ 0.69
SCG2P13521 KRT8P39-201ENST00000396270 1433 ntBASIC19.34■□□□□ 0.69
SCG2P13521 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCG2P13521 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.33■□□□□ 0.69
SCG2P13521 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.33■□□□□ 0.69
SCG2P13521 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.33■□□□□ 0.69
SCG2P13521 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SCG2P13521 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCG2P13521 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.33■□□□□ 0.68
SCG2P13521 AC023274.1-201ENST00000418278 595 ntBASIC19.33■□□□□ 0.68
SCG2P13521 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.33■□□□□ 0.68
SCG2P13521 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.33■□□□□ 0.68
SCG2P13521 AC040169.1-201ENST00000565382 521 ntBASIC19.33■□□□□ 0.68
SCG2P13521 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.33■□□□□ 0.68
SCG2P13521 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.33■□□□□ 0.68
SCG2P13521 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SCG2P13521 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.33■□□□□ 0.68
SCG2P13521 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SCG2P13521 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCG2P13521 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 AC092171.3-201ENST00000610122 2651 ntBASIC19.32■□□□□ 0.68
SCG2P13521 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
SCG2P13521 UBALD1-205ENST00000590891 2641 ntBASIC19.32■□□□□ 0.68
SCG2P13521 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 RNU1-129P-201ENST00000384064 167 ntBASIC19.32■□□□□ 0.68
SCG2P13521 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.32■□□□□ 0.68
SCG2P13521 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.32■□□□□ 0.68
SCG2P13521 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.32■□□□□ 0.68
SCG2P13521 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.32■□□□□ 0.68
SCG2P13521 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 U1.21-201ENST00000580816 167 ntBASIC19.32■□□□□ 0.68
SCG2P13521 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.32■□□□□ 0.68
SCG2P13521 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.32■□□□□ 0.68
SCG2P13521 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
SCG2P13521 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCG2P13521 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG2P13521 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCG2P13521 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SCG2P13521 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms