Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.87■□□□□ 0.61
COL11A1P12107 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
COL11A1P12107 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL11A1P12107 KRT8P12-202ENST00000472924 1397 ntBASIC18.86■□□□□ 0.61
COL11A1P12107 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
COL11A1P12107 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
COL11A1P12107 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 SPTLC1P1-201ENST00000447199 261 ntBASIC18.86■□□□□ 0.61
COL11A1P12107 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 AC105021.1-202ENST00000570572 669 ntBASIC18.86■□□□□ 0.61
COL11A1P12107 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.86■□□□□ 0.61
COL11A1P12107 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
COL11A1P12107 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL11A1P12107 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL11A1P12107 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL11A1P12107 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.86■□□□□ 0.61
COL11A1P12107 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.86■□□□□ 0.61
COL11A1P12107 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.86■□□□□ 0.61
COL11A1P12107 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 PIN1P1-201ENST00000412108 996 ntBASIC18.86■□□□□ 0.61
COL11A1P12107 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.86■□□□□ 0.61
COL11A1P12107 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.86■□□□□ 0.61
COL11A1P12107 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.86■□□□□ 0.61
COL11A1P12107 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.86■□□□□ 0.61
COL11A1P12107 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.86■□□□□ 0.61
COL11A1P12107 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL11A1P12107 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL11A1P12107 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.85■□□□□ 0.61
COL11A1P12107 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 AC005915.1-201ENST00000624912 2018 ntBASIC18.85■□□□□ 0.61
COL11A1P12107 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.85■□□□□ 0.61
COL11A1P12107 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 AC007274.1-201ENST00000439805 662 ntBASIC18.85■□□□□ 0.61
COL11A1P12107 AL512638.1-201ENST00000457493 794 ntBASIC18.85■□□□□ 0.61
COL11A1P12107 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 AP002490.2-201ENST00000524791 560 ntBASIC18.85■□□□□ 0.61
COL11A1P12107 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COL11A1P12107 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.85■□□□□ 0.61
COL11A1P12107 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
COL11A1P12107 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL11A1P12107 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.85■□□□□ 0.61
COL11A1P12107 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL11A1P12107 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL11A1P12107 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.84■□□□□ 0.61
COL11A1P12107 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.84■□□□□ 0.61
COL11A1P12107 API5-211ENST00000534695 560 ntTSL 5 BASIC18.84■□□□□ 0.61
COL11A1P12107 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
COL11A1P12107 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL11A1P12107 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms