Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 AKR1C7P-201ENST00000305623 895 ntBASIC16.47■□□□□ 0.23
PCNAP12004 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.47■□□□□ 0.23
PCNAP12004 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 PRYP5-201ENST00000451909 266 ntBASIC16.47■□□□□ 0.23
PCNAP12004 SCARNA2-201ENST00000458748 420 ntBASIC16.47■□□□□ 0.23
PCNAP12004 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PCNAP12004 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.47■□□□□ 0.23
PCNAP12004 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.47■□□□□ 0.23
PCNAP12004 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.47■□□□□ 0.23
PCNAP12004 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
PCNAP12004 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCNAP12004 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.47■□□□□ 0.23
PCNAP12004 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCNAP12004 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.46■□□□□ 0.23
PCNAP12004 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.46■□□□□ 0.23
PCNAP12004 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.46■□□□□ 0.23
PCNAP12004 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCNAP12004 MTDHP4-201ENST00000600287 670 ntBASIC16.46■□□□□ 0.23
PCNAP12004 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCNAP12004 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PCNAP12004 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.46■□□□□ 0.23
PCNAP12004 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 FLJ16779-201ENST00000612722 7638 ntBASIC16.46■□□□□ 0.23
PCNAP12004 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.46■□□□□ 0.23
PCNAP12004 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
PCNAP12004 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PCNAP12004 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PCNAP12004 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCNAP12004 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCNAP12004 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.45■□□□□ 0.22
PCNAP12004 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCNAP12004 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 AF238378.1-201ENST00000526806 358 ntBASIC16.45■□□□□ 0.22
PCNAP12004 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.45■□□□□ 0.22
PCNAP12004 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 AL353135.1-201ENST00000606729 504 ntBASIC16.45■□□□□ 0.22
PCNAP12004 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.45■□□□□ 0.22
PCNAP12004 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.45■□□□□ 0.22
PCNAP12004 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCNAP12004 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PCNAP12004 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
PCNAP12004 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCNAP12004 AL162727.3-201ENST00000635661 2787 ntBASIC16.44■□□□□ 0.22
PCNAP12004 AC092171.3-201ENST00000610122 2651 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms