Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MIR600HG-201ENST00000449175 5984 ntBASIC18.96■□□□□ 0.63
TPM3P06753 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.95■□□□□ 0.62
TPM3P06753 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 SLC25A3P1-201ENST00000443844 931 ntBASIC18.95■□□□□ 0.62
TPM3P06753 AC092597.1-201ENST00000487352 616 ntBASIC18.95■□□□□ 0.62
TPM3P06753 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.95■□□□□ 0.62
TPM3P06753 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.95■□□□□ 0.62
TPM3P06753 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TPM3P06753 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TPM3P06753 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TPM3P06753 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.95■□□□□ 0.62
TPM3P06753 TUBB8P12-201ENST00000308911 1335 ntBASIC18.95■□□□□ 0.62
TPM3P06753 TUBB7P-202ENST00000428444 1305 ntBASIC18.95■□□□□ 0.62
TPM3P06753 TUBB8P7-204ENST00000567960 1332 ntBASIC18.95■□□□□ 0.62
TPM3P06753 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TPM3P06753 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TPM3P06753 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 AC022532.1-201ENST00000624563 1728 ntBASIC18.94■□□□□ 0.62
TPM3P06753 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM3P06753 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TPM3P06753 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TPM3P06753 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TPM3P06753 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.94■□□□□ 0.62
TPM3P06753 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.94■□□□□ 0.62
TPM3P06753 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.94■□□□□ 0.62
TPM3P06753 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM3P06753 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TPM3P06753 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TPM3P06753 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.94■□□□□ 0.62
TPM3P06753 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TPM3P06753 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM3P06753 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TPM3P06753 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.93■□□□□ 0.62
TPM3P06753 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TPM3P06753 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.93■□□□□ 0.62
TPM3P06753 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TPM3P06753 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.93■□□□□ 0.62
TPM3P06753 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.93■□□□□ 0.62
TPM3P06753 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 STK25P1-201ENST00000585406 838 ntBASIC18.93■□□□□ 0.62
TPM3P06753 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.93■□□□□ 0.62
TPM3P06753 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TPM3P06753 FRMD8P1-201ENST00000440433 1524 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms