Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 ELL2P1-201ENST00000413990 1906 ntBASIC20.16■□□□□ 0.82
CHGBP05060 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHGBP05060 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CHGBP05060 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 HCG4-201ENST00000418983 998 ntBASIC20.16■□□□□ 0.82
CHGBP05060 RPS8P6-201ENST00000426177 609 ntBASIC20.16■□□□□ 0.82
CHGBP05060 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.16■□□□□ 0.82
CHGBP05060 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.16■□□□□ 0.82
CHGBP05060 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
CHGBP05060 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
CHGBP05060 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.16■□□□□ 0.82
CHGBP05060 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 AL031055.1-201ENST00000606362 631 ntBASIC20.16■□□□□ 0.82
CHGBP05060 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.16■□□□□ 0.82
CHGBP05060 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.16■□□□□ 0.82
CHGBP05060 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.16■□□□□ 0.82
CHGBP05060 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CHGBP05060 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
CHGBP05060 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
CHGBP05060 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHGBP05060 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.16■□□□□ 0.82
CHGBP05060 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
CHGBP05060 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.15■□□□□ 0.82
CHGBP05060 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.15■□□□□ 0.82
CHGBP05060 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.15■□□□□ 0.82
CHGBP05060 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.15■□□□□ 0.82
CHGBP05060 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.15■□□□□ 0.82
CHGBP05060 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.15■□□□□ 0.82
CHGBP05060 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHGBP05060 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 AL662844.4-201ENST00000606367 2838 ntBASIC20.15■□□□□ 0.82
CHGBP05060 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHGBP05060 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CHGBP05060 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.14■□□□□ 0.82
CHGBP05060 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
CHGBP05060 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHGBP05060 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 ALOX12P2-203ENST00000570921 1945 ntBASIC20.14■□□□□ 0.81
CHGBP05060 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.14■□□□□ 0.81
CHGBP05060 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHGBP05060 AC092474.2-201ENST00000424288 719 ntBASIC20.14■□□□□ 0.81
CHGBP05060 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.14■□□□□ 0.81
CHGBP05060 DNAJB3-201ENST00000446806 729 ntBASIC20.14■□□□□ 0.81
CHGBP05060 CEND1P1-201ENST00000451006 455 ntBASIC20.14■□□□□ 0.81
CHGBP05060 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.14■□□□□ 0.81
CHGBP05060 KRT8P48-201ENST00000515599 1220 ntBASIC20.14■□□□□ 0.81
CHGBP05060 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.14■□□□□ 0.81
CHGBP05060 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CHGBP05060 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms