Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ERBB2P04626 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.68■□□□□ 0.42
ERBB2P04626 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ERBB2P04626 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.67■□□□□ 0.42
ERBB2P04626 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 AL512652.2-201ENST00000625156 1716 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ERBB2P04626 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ERBB2P04626 HCG4-201ENST00000418983 998 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 AL513480.1-201ENST00000451731 511 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 HLA-J-202ENST00000469281 1241 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.67■□□□□ 0.42
ERBB2P04626 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.67■□□□□ 0.42
ERBB2P04626 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ERBB2P04626 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.67■□□□□ 0.42
ERBB2P04626 AC096734.2-201ENST00000562054 433 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 AC018845.2-201ENST00000568326 409 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
ERBB2P04626 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.67■□□□□ 0.42
ERBB2P04626 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.67■□□□□ 0.42
ERBB2P04626 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ERBB2P04626 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ERBB2P04626 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 ZNF259P1-201ENST00000407656 1365 ntBASIC17.66■□□□□ 0.42
ERBB2P04626 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ERBB2P04626 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.66■□□□□ 0.42
ERBB2P04626 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 RHOQP3-201ENST00000437982 621 ntBASIC17.66■□□□□ 0.42
ERBB2P04626 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.66■□□□□ 0.42
ERBB2P04626 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 MIR4515-201ENST00000584082 81 ntBASIC17.66■□□□□ 0.42
ERBB2P04626 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.66■□□□□ 0.42
ERBB2P04626 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.66■□□□□ 0.42
ERBB2P04626 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 AC012569.1-201ENST00000591191 1524 ntBASIC17.66■□□□□ 0.42
ERBB2P04626 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERBB2P04626 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.66■□□□□ 0.42
ERBB2P04626 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
ERBB2P04626 KRT8P39-201ENST00000396270 1433 ntBASIC17.65■□□□□ 0.42
ERBB2P04626 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ERBB2P04626 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.65■□□□□ 0.42
ERBB2P04626 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.65■□□□□ 0.42
ERBB2P04626 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.65■□□□□ 0.42
ERBB2P04626 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ERBB2P04626 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERBB2P04626 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.65■□□□□ 0.42
ERBB2P04626 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ERBB2P04626 AL118508.1-201ENST00000613502 2345 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms