Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM3O75382 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 UBALD1-205ENST00000590891 2641 ntBASIC15.78■□□□□ 0.12
TRIM3O75382 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM3O75382 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
TRIM3O75382 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRIM3O75382 AC104109.2-201ENST00000602919 1418 ntBASIC15.77■□□□□ 0.12
TRIM3O75382 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRIM3O75382 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 ZNF259P1-201ENST00000407656 1365 ntBASIC15.77■□□□□ 0.12
TRIM3O75382 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRIM3O75382 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 MIR574-201ENST00000385209 96 ntBASIC15.77■□□□□ 0.12
TRIM3O75382 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRIM3O75382 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM3O75382 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM3O75382 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM3O75382 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 AL671883.3-201ENST00000603274 991 ntBASIC15.77■□□□□ 0.12
TRIM3O75382 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM3O75382 AC105020.1-201ENST00000435356 2205 ntBASIC15.77■□□□□ 0.12
TRIM3O75382 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM3O75382 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM3O75382 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.77■□□□□ 0.11
TRIM3O75382 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM3O75382 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM3O75382 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.77■□□□□ 0.11
TRIM3O75382 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM3O75382 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRIM3O75382 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRIM3O75382 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRIM3O75382 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 AC009947.1-201ENST00000444350 727 ntBASIC15.76■□□□□ 0.11
TRIM3O75382 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 AC034105.1-201ENST00000563488 319 ntBASIC15.76■□□□□ 0.11
TRIM3O75382 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 AL805961.1-202ENST00000641562 540 ntBASIC15.76■□□□□ 0.11
TRIM3O75382 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM3O75382 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRIM3O75382 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM3O75382 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM3O75382 PCDHA1-201ENST00000378133 2726 ntBASIC15.76■□□□□ 0.11
TRIM3O75382 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRIM3O75382 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRIM3O75382 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRIM3O75382 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM3O75382 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM3O75382 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM3O75382 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM3O75382 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms