Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC005237.2-201ENST00000434368 219 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 CNN2P2-201ENST00000443536 909 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 CNN2P3-201ENST00000450201 906 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 KRT8P48-201ENST00000515599 1220 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AL136317.3-201ENST00000618497 906 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 Z92544.3-201ENST00000624747 417 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.72■□□□□ 0.27
PCDHGA12O60330 NKILA-202ENST00000614771 2598 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCDHGA12O60330 AC011676.5-201ENST00000624864 2660 ntBASIC16.72■□□□□ 0.27
PCDHGA12O60330 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 PMS2P4-201ENST00000412466 1052 ntBASIC16.71■□□□□ 0.27
PCDHGA12O60330 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 AC069335.1-201ENST00000489972 472 ntBASIC16.71■□□□□ 0.27
PCDHGA12O60330 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 AC190387.1-201ENST00000551683 408 ntBASIC16.71■□□□□ 0.27
PCDHGA12O60330 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCDHGA12O60330 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
PCDHGA12O60330 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PCDHGA12O60330 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA12O60330 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA12O60330 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA12O60330 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.71■□□□□ 0.26
PCDHGA12O60330 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCDHGA12O60330 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AL592309.1-201ENST00000443127 649 ntBASIC16.7■□□□□ 0.26
PCDHGA12O60330 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AL390955.2-201ENST00000603032 514 ntBASIC16.7■□□□□ 0.26
PCDHGA12O60330 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCDHGA12O60330 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms