Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 AL391256.1-201ENST00000443260 1855 ntBASIC20.16■□□□□ 0.82
SEMA3EO15041 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA3EO15041 KLF2P3-201ENST00000451977 1087 ntBASIC20.16■□□□□ 0.82
SEMA3EO15041 PRYP6-201ENST00000514804 343 ntBASIC20.16■□□□□ 0.82
SEMA3EO15041 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA3EO15041 AC011467.4-201ENST00000594891 528 ntBASIC20.16■□□□□ 0.82
SEMA3EO15041 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SEMA3EO15041 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SEMA3EO15041 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.15■□□□□ 0.82
SEMA3EO15041 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.15■□□□□ 0.82
SEMA3EO15041 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 SPCS2P1-201ENST00000561636 679 ntBASIC20.15■□□□□ 0.82
SEMA3EO15041 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.15■□□□□ 0.82
SEMA3EO15041 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SEMA3EO15041 AC005498.2-205ENST00000593218 784 ntBASIC20.15■□□□□ 0.82
SEMA3EO15041 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.15■□□□□ 0.82
SEMA3EO15041 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.15■□□□□ 0.82
SEMA3EO15041 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.15■□□□□ 0.82
SEMA3EO15041 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SEMA3EO15041 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SEMA3EO15041 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.15■□□□□ 0.82
SEMA3EO15041 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SEMA3EO15041 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.15■□□□□ 0.82
SEMA3EO15041 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SEMA3EO15041 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SEMA3EO15041 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SEMA3EO15041 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SEMA3EO15041 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SEMA3EO15041 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.14■□□□□ 0.82
SEMA3EO15041 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.14■□□□□ 0.82
SEMA3EO15041 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.14■□□□□ 0.81
SEMA3EO15041 AC008677.1-201ENST00000519230 1561 ntBASIC20.14■□□□□ 0.81
SEMA3EO15041 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.14■□□□□ 0.81
SEMA3EO15041 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.14■□□□□ 0.81
SEMA3EO15041 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.14■□□□□ 0.81
SEMA3EO15041 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SEMA3EO15041 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.14■□□□□ 0.81
SEMA3EO15041 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.14■□□□□ 0.81
SEMA3EO15041 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SEMA3EO15041 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SEMA3EO15041 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.14■□□□□ 0.81
SEMA3EO15041 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
SEMA3EO15041 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEMA3EO15041 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.13■□□□□ 0.81
SEMA3EO15041 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SEMA3EO15041 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEMA3EO15041 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.13■□□□□ 0.81
SEMA3EO15041 AC107890.1-201ENST00000422478 521 ntBASIC20.13■□□□□ 0.81
SEMA3EO15041 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.13■□□□□ 0.81
SEMA3EO15041 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.13■□□□□ 0.81
SEMA3EO15041 DUX4L27-201ENST00000554796 1261 ntBASIC20.13■□□□□ 0.81
SEMA3EO15041 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms