Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.54■□□□□ 0.24
CDC7O00311 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 FAM197Y8-203ENST00000450145 560 ntBASIC16.54■□□□□ 0.24
CDC7O00311 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 RPS15P9-201ENST00000494093 319 ntBASIC16.54■□□□□ 0.24
CDC7O00311 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.54■□□□□ 0.24
CDC7O00311 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 DOC2GP-204ENST00000639052 2548 ntBASIC16.54■□□□□ 0.24
CDC7O00311 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC7O00311 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDC7O00311 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC7O00311 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDC7O00311 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CDC7O00311 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 AC005052.1-201ENST00000625181 2492 ntBASIC16.53■□□□□ 0.24
CDC7O00311 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CDC7O00311 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC7O00311 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.53■□□□□ 0.24
CDC7O00311 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC7O00311 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.53■□□□□ 0.24
CDC7O00311 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.53■□□□□ 0.24
CDC7O00311 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.53■□□□□ 0.24
CDC7O00311 MPDU1-223ENST00000582151 728 ntBASIC16.53■□□□□ 0.24
CDC7O00311 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 AL121912.1-201ENST00000603683 238 ntBASIC16.53■□□□□ 0.24
CDC7O00311 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC7O00311 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.53■□□□□ 0.24
CDC7O00311 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 AL691432.3-201ENST00000621860 400 ntBASIC16.53■□□□□ 0.24
CDC7O00311 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 SNX33P1-201ENST00000592116 1762 ntBASIC16.53■□□□□ 0.24
CDC7O00311 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDC7O00311 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.53■□□□□ 0.24
CDC7O00311 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDC7O00311 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC7O00311 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.52■□□□□ 0.24
CDC7O00311 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDC7O00311 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC7O00311 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC7O00311 AC079781.3-201ENST00000449110 356 ntBASIC16.52■□□□□ 0.24
CDC7O00311 HLA-J-202ENST00000469281 1241 ntBASIC16.52■□□□□ 0.24
CDC7O00311 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.52■□□□□ 0.24
CDC7O00311 AC012640.2-201ENST00000561606 901 ntBASIC16.52■□□□□ 0.24
CDC7O00311 MIR4492-201ENST00000581627 80 ntBASIC16.52■□□□□ 0.24
CDC7O00311 AC148477.8-201ENST00000624298 468 ntBASIC16.52■□□□□ 0.24
CDC7O00311 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDC7O00311 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms