Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC196A0A1B0GTZ2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 IGLL3P-201ENST00000412472 434 ntBASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 MIR4515-201ENST00000584082 81 ntBASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 CYP2A7P1-201ENST00000595391 815 ntBASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC196A0A1B0GTZ2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC012569.1-201ENST00000591191 1524 ntBASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC106730.1-201ENST00000566722 1090 ntBASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL645728.2-201ENST00000641974 660 ntBASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC196A0A1B0GTZ2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 RHOQP3-201ENST00000437982 621 ntBASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 AL513480.1-201ENST00000451731 511 ntBASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC196A0A1B0GTZ2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC196A0A1B0GTZ2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms