Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 LINC00896-202ENST00000609602 2128 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 AC027307.2-201ENST00000591252 911 ntBASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 AP001059.3-201ENST00000619053 235 ntBASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 AC016027.1-202ENST00000607927 1699 ntBASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TBC1D3DA0A087WVF3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3DA0A087WVF3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3DA0A087WVF3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TBC1D3DA0A087WVF3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 DUX4L27-201ENST00000554796 1261 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 SPCS2P1-201ENST00000561636 679 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 MIR4492-201ENST00000581627 80 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 AC015911.4-201ENST00000588022 1070 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 AC008267.7-201ENST00000624570 1194 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.7■□□□□ 0.26
TBC1D3DA0A087WVF3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 AC092053.1-201ENST00000605787 1936 ntBASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 GPS2P2-201ENST00000430745 888 ntBASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 AC069262.1-201ENST00000539058 672 ntBASIC16.69■□□□□ 0.26
TBC1D3DA0A087WVF3 AL512356.2-201ENST00000546955 174 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms