Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 KRT18P67-201ENST00000432816 1264 ntBASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 RPS2P1-201ENST00000434010 821 ntBASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 FAM197Y8-203ENST00000450145 560 ntBASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 RPS15P9-201ENST00000494093 319 ntBASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 UNC93B7-201ENST00000509439 705 ntBASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS9D1Q9Y2B5 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AC002310.6-201ENST00000624451 1377 ntBASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 DUSP5P1-201ENST00000441325 1139 ntBASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 AL118508.1-201ENST00000613502 2345 ntBASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS9D1Q9Y2B5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 AC129492.6-201ENST00000611383 1305 ntBASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 AC006538.1-201ENST00000567905 1585 ntBASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 AL603841.1-201ENST00000430516 664 ntBASIC16.78■□□□□ 0.28
VPS9D1Q9Y2B5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms