Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH9Q9ULB4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 AL391256.1-201ENST00000443260 1855 ntBASIC17.77■□□□□ 0.43
CDH9Q9ULB4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDH9Q9ULB4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SPDYE11-202ENST00000450699 704 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 RN7SL589P-201ENST00000481268 310 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AL135744.1-201ENST00000565098 629 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SPDYE9P-201ENST00000570642 692 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AC022145.2-201ENST00000598203 171 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SPDYE10P-202ENST00000612005 668 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SPDYE8P-202ENST00000612377 668 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 AC020916.1-201ENST00000587762 1774 ntBASIC17.76■□□□□ 0.43
CDH9Q9ULB4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDH9Q9ULB4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 WASH6P-202ENST00000359512 1437 ntBASIC17.75■□□□□ 0.43
CDH9Q9ULB4 KRT8P39-201ENST00000396270 1433 ntBASIC17.75■□□□□ 0.43
CDH9Q9ULB4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 TIMM8BP1-201ENST00000452384 211 ntBASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 AC004835.2-201ENST00000603762 682 ntBASIC17.75■□□□□ 0.43
CDH9Q9ULB4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 AL645728.1-201ENST00000366221 2101 ntBASIC17.75■□□□□ 0.43
CDH9Q9ULB4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH9Q9ULB4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 SNX33P1-201ENST00000592116 1762 ntBASIC17.74■□□□□ 0.43
CDH9Q9ULB4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CDH9Q9ULB4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms