Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 AL391005.1-201ENST00000623953 2435 ntBASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE7Q9UBL6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 TFAMP1-201ENST00000412727 736 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 AC092474.2-201ENST00000424288 719 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 SPDYE11-202ENST00000450699 704 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 SPDYE9P-201ENST00000570642 692 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 MIR4492-201ENST00000581627 80 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 AC092068.3-201ENST00000587894 2016 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 CYP2A7P1-201ENST00000595391 815 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 SPDYE10P-202ENST00000612005 668 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 SPDYE8P-202ENST00000612377 668 ntBASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE7Q9UBL6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AKAP8P1-201ENST00000434743 1349 ntBASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 PMS2P4-201ENST00000412466 1052 ntBASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 RN7SL589P-201ENST00000481268 310 ntBASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 KRT8P48-201ENST00000515599 1220 ntBASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 MIR3909-201ENST00000579518 119 ntBASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE7Q9UBL6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE7Q9UBL6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms