Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 AP3S2-216ENST00000617003 1561 ntBASIC17.79■□□□□ 0.44
TLR9Q9NR96 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.79■□□□□ 0.44
TLR9Q9NR96 NME2P1-201ENST00000426182 414 ntBASIC17.79■□□□□ 0.44
TLR9Q9NR96 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.79■□□□□ 0.44
TLR9Q9NR96 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 AL138828.2-201ENST00000615812 383 ntBASIC17.78■□□□□ 0.44
TLR9Q9NR96 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.78■□□□□ 0.44
TLR9Q9NR96 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TLR9Q9NR96 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.77■□□□□ 0.44
TLR9Q9NR96 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 COX5BP8-201ENST00000416911 349 ntBASIC17.77■□□□□ 0.44
TLR9Q9NR96 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 KRT18P34-201ENST00000488218 1270 ntBASIC17.77■□□□□ 0.44
TLR9Q9NR96 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 AC073389.1-201ENST00000595595 795 ntBASIC17.77■□□□□ 0.44
TLR9Q9NR96 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TLR9Q9NR96 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TLR9Q9NR96 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TLR9Q9NR96 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.77■□□□□ 0.43
TLR9Q9NR96 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms