Protein–RNA interactions for Protein: Q9NQV8

PRDM8, PR domain zinc finger protein 8, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8Q9NQV8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 UPF3AP3-201ENST00000420996 769 ntBASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 AC025580.3-201ENST00000617932 1424 ntBASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PRDM8Q9NQV8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 RPSAP43-201ENST00000402237 625 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 GPX1P2-201ENST00000429271 606 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC112482.1-201ENST00000492080 688 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 KRT19P2-202ENST00000557173 1012 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 MTDHP5-201ENST00000598980 586 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ACTL9-202ENST00000612068 1252 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC129492.6-201ENST00000611383 1305 ntBASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRDM8Q9NQV8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PRDM8Q9NQV8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 MCCD1P2-201ENST00000423228 335 ntBASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 DNAJB3-201ENST00000446806 729 ntBASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 MIR3687-2-201ENST00000577708 61 ntBASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 AC023141.13-201ENST00000604991 943 ntBASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 MIR3687-1-201ENST00000614492 61 ntBASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRDM8Q9NQV8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms