Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 AP001094.4-201ENST00000579008 2176 ntBASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 AC084018.2-201ENST00000613093 2607 ntBASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.86■□□□□ 0.29
TM9SF3Q9HD45 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 LINC00304-203ENST00000565008 1864 ntBASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 AL035633.1-201ENST00000406139 838 ntBASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 AL592309.1-201ENST00000443127 649 ntBASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 AC079140.1-201ENST00000508039 487 ntBASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF3Q9HD45 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 LYSMD4-203ENST00000378904 2122 ntBASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 TFAMP1-201ENST00000412727 736 ntBASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 RN7SL589P-201ENST00000481268 310 ntBASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF3Q9HD45 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms