Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 AC103564.2-201ENST00000432853 1299 ntBASIC16.18■□□□□ 0.18
PIF1Q9H611 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.18■□□□□ 0.18
PIF1Q9H611 AC122714.2-201ENST00000502787 707 ntBASIC16.18■□□□□ 0.18
PIF1Q9H611 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.18■□□□□ 0.18
PIF1Q9H611 NTF6B-201ENST00000591913 560 ntBASIC16.18■□□□□ 0.18
PIF1Q9H611 AC083849.1-201ENST00000615227 514 ntBASIC16.18■□□□□ 0.18
PIF1Q9H611 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
PIF1Q9H611 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.18■□□□□ 0.18
PIF1Q9H611 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.18■□□□□ 0.18
PIF1Q9H611 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.18■□□□□ 0.18
PIF1Q9H611 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
PIF1Q9H611 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PIF1Q9H611 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PIF1Q9H611 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.18■□□□□ 0.18
PIF1Q9H611 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.18■□□□□ 0.18
PIF1Q9H611 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.17■□□□□ 0.18
PIF1Q9H611 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PIF1Q9H611 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PIF1Q9H611 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PIF1Q9H611 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.17■□□□□ 0.18
PIF1Q9H611 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.17■□□□□ 0.18
PIF1Q9H611 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 AL138831.2-201ENST00000606564 490 ntBASIC16.17■□□□□ 0.18
PIF1Q9H611 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.17■□□□□ 0.18
PIF1Q9H611 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 AP002414.2-201ENST00000591780 3365 ntBASIC16.17■□□□□ 0.18
PIF1Q9H611 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.17■□□□□ 0.18
PIF1Q9H611 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
PIF1Q9H611 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 AC009336.1-201ENST00000608941 1553 ntBASIC16.17■□□□□ 0.18
PIF1Q9H611 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.17■□□□□ 0.18
PIF1Q9H611 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PIF1Q9H611 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 NORAD-201ENST00000565493 5339 ntBASIC16.16■□□□□ 0.18
PIF1Q9H611 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PIF1Q9H611 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
PIF1Q9H611 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PIF1Q9H611 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 FAM220CP-201ENST00000395253 831 ntBASIC16.16■□□□□ 0.18
PIF1Q9H611 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 AL845331.1-201ENST00000424978 1190 ntBASIC16.16■□□□□ 0.18
PIF1Q9H611 TSPY22P-201ENST00000427496 604 ntBASIC16.16■□□□□ 0.18
PIF1Q9H611 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.16■□□□□ 0.18
PIF1Q9H611 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.16■□□□□ 0.18
PIF1Q9H611 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.16■□□□□ 0.18
PIF1Q9H611 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
PIF1Q9H611 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.16■□□□□ 0.18
PIF1Q9H611 AL592071.1-201ENST00000611956 408 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms