Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 SLC22A20-204ENST00000530038 1673 ntBASIC17.1■□□□□ 0.33
SEMA3CQ99985 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC064836.3-201ENST00000607928 673 ntBASIC17.1■□□□□ 0.33
SEMA3CQ99985 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC006277.1-201ENST00000624348 1610 ntBASIC17.1■□□□□ 0.33
SEMA3CQ99985 LINC00895-201ENST00000629028 1637 ntBASIC17.1■□□□□ 0.33
SEMA3CQ99985 AC131009.4-201ENST00000624048 1740 ntBASIC17.1■□□□□ 0.33
SEMA3CQ99985 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA3CQ99985 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
SEMA3CQ99985 AGGF1P2-201ENST00000426656 2106 ntBASIC17.09■□□□□ 0.33
SEMA3CQ99985 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 BX842568.4-201ENST00000421222 227 ntBASIC17.09■□□□□ 0.33
SEMA3CQ99985 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.09■□□□□ 0.33
SEMA3CQ99985 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 AC010507.1-201ENST00000633895 436 ntBASIC17.09■□□□□ 0.33
SEMA3CQ99985 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA3CQ99985 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA3CQ99985 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 FLJ38576-201ENST00000623820 2459 ntBASIC17.08■□□□□ 0.33
SEMA3CQ99985 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.08■□□□□ 0.33
SEMA3CQ99985 AL603756.1-201ENST00000606511 2163 ntBASIC17.08■□□□□ 0.33
SEMA3CQ99985 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SEMA3CQ99985 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SEMA3CQ99985 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA3CQ99985 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA3CQ99985 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA3CQ99985 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SEMA3CQ99985 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEMA3CQ99985 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.08■□□□□ 0.32
SEMA3CQ99985 KRT18P2-201ENST00000447938 1258 ntBASIC17.08■□□□□ 0.32
SEMA3CQ99985 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.08■□□□□ 0.32
SEMA3CQ99985 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms