Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 CRYGEP-201ENST00000412192 528 ntBASIC16.42■□□□□ 0.22
PKP4Q99569 PMS2P1-201ENST00000431037 1228 ntBASIC16.42■□□□□ 0.22
PKP4Q99569 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.42■□□□□ 0.22
PKP4Q99569 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.42■□□□□ 0.22
PKP4Q99569 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.42■□□□□ 0.22
PKP4Q99569 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.42■□□□□ 0.22
PKP4Q99569 AC145285.3-201ENST00000564603 959 ntBASIC16.42■□□□□ 0.22
PKP4Q99569 BX640515.1-201ENST00000617215 977 ntBASIC16.42■□□□□ 0.22
PKP4Q99569 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.42■□□□□ 0.22
PKP4Q99569 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PKP4Q99569 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PKP4Q99569 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PKP4Q99569 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
PKP4Q99569 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 AC006277.1-201ENST00000624348 1610 ntBASIC16.41■□□□□ 0.22
PKP4Q99569 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
PKP4Q99569 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.41■□□□□ 0.22
PKP4Q99569 SLC25A1P1-201ENST00000528351 927 ntBASIC16.41■□□□□ 0.22
PKP4Q99569 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 AC034105.1-201ENST00000563488 319 ntBASIC16.41■□□□□ 0.22
PKP4Q99569 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.41■□□□□ 0.22
PKP4Q99569 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 AC120114.3-201ENST00000611923 658 ntBASIC16.41■□□□□ 0.22
PKP4Q99569 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.41■□□□□ 0.22
PKP4Q99569 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.41■□□□□ 0.22
PKP4Q99569 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 AL603756.1-201ENST00000606511 2163 ntBASIC16.41■□□□□ 0.22
PKP4Q99569 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PKP4Q99569 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.41■□□□□ 0.22
PKP4Q99569 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PKP4Q99569 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP4Q99569 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PKP4Q99569 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.4■□□□□ 0.22
PKP4Q99569 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 SLC22A20-204ENST00000530038 1673 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
PKP4Q99569 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 FAM185BP-201ENST00000443595 716 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PKP4Q99569 AC091167.2-201ENST00000579581 588 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 MIR4492-201ENST00000581627 80 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
PKP4Q99569 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
PKP4Q99569 AC013467.2-201ENST00000605472 835 ntBASIC16.4■□□□□ 0.22
PKP4Q99569 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PKP4Q99569 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PKP4Q99569 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.4■□□□□ 0.22
PKP4Q99569 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms