Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ADH5P3-201ENST00000433842 1137 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 SPDYE11-202ENST00000450699 704 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 SPDYE9P-201ENST00000570642 692 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 SPDYE10P-202ENST00000612005 668 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 SPDYE8P-202ENST00000612377 668 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 AC105339.1-204ENST00000636249 355 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 WASH6P-202ENST00000359512 1437 ntBASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDK5RAP1Q96SZ6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 TFAMP1-201ENST00000412727 736 ntBASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 AC092183.1-201ENST00000469884 875 ntBASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 AL596442.2-201ENST00000610240 980 ntBASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 AL645608.8-201ENST00000606034 2086 ntBASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
CDK5RAP1Q96SZ6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CDK5RAP1Q96SZ6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms