Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5RAP2Q96SN8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 FAM207CP-201ENST00000443486 507 ntBASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 AC138761.1-201ENST00000584393 385 ntBASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 AL844908.2-201ENST00000609461 460 ntBASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 SPTSSB-204ENST00000617024 1292 ntBASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5RAP2Q96SN8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 MIR943-201ENST00000401286 94 ntBASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 AC241585.1-201ENST00000433527 519 ntBASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 TSPY16P-201ENST00000449843 468 ntBASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5RAP2Q96SN8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 PCGF3-213ENST00000620529 1899 ntBASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.58■□□□□ 0.72
CDK5RAP2Q96SN8 AC022144.1-201ENST00000602255 1580 ntBASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 AC105020.1-201ENST00000435356 2205 ntBASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDK5RAP2Q96SN8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 AC018529.1-201ENST00000613063 361 ntBASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.56■□□□□ 0.72
CDK5RAP2Q96SN8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms