Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.02■□□□□ 0.16
BBS4Q96RK4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.02■□□□□ 0.16
BBS4Q96RK4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.02■□□□□ 0.15
BBS4Q96RK4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.02■□□□□ 0.15
BBS4Q96RK4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
BBS4Q96RK4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BBS4Q96RK4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.01■□□□□ 0.15
BBS4Q96RK4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.01■□□□□ 0.15
BBS4Q96RK4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 AC107918.4-202ENST00000641623 219 ntBASIC16.01■□□□□ 0.15
BBS4Q96RK4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.01■□□□□ 0.15
BBS4Q96RK4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 PCDHA14-201ENST00000506751 2298 ntBASIC16.01■□□□□ 0.15
BBS4Q96RK4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BBS4Q96RK4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BBS4Q96RK4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16■□□□□ 0.15
BBS4Q96RK4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16■□□□□ 0.15
BBS4Q96RK4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16■□□□□ 0.15
BBS4Q96RK4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16■□□□□ 0.15
BBS4Q96RK4 PTCHD3P3-201ENST00000403073 906 ntBASIC16■□□□□ 0.15
BBS4Q96RK4 RPS2P1-201ENST00000434010 821 ntBASIC16■□□□□ 0.15
BBS4Q96RK4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 RNPS1P1-201ENST00000507437 918 ntBASIC16■□□□□ 0.15
BBS4Q96RK4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16■□□□□ 0.15
BBS4Q96RK4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16■□□□□ 0.15
BBS4Q96RK4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16■□□□□ 0.15
BBS4Q96RK4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
BBS4Q96RK4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
BBS4Q96RK4 KRT8P49-201ENST00000604166 1432 ntBASIC16■□□□□ 0.15
BBS4Q96RK4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
BBS4Q96RK4 AC006504.4-201ENST00000592118 1568 ntBASIC16■□□□□ 0.15
BBS4Q96RK4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
BBS4Q96RK4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms