Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 MIR3197-201ENST00000582241 73 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 AC099522.2-201ENST00000607001 744 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 CROCCP1-201ENST00000426910 5675 ntBASIC13.73□□□□□ -0.21
ZNF48Q96MX3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
ZNF48Q96MX3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 OR6D1P-202ENST00000641007 5290 ntBASIC13.72□□□□□ -0.21
ZNF48Q96MX3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC093520.2-201ENST00000561830 333 ntBASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 AC093512.1-201ENST00000617969 520 ntBASIC13.72□□□□□ -0.21
ZNF48Q96MX3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
ZNF48Q96MX3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AP001094.4-201ENST00000579008 2176 ntBASIC13.71□□□□□ -0.21
ZNF48Q96MX3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AC002056.1-201ENST00000395613 760 ntBASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AL355306.1-201ENST00000415580 579 ntBASIC13.71□□□□□ -0.21
ZNF48Q96MX3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.71□□□□□ -0.21
ZNF48Q96MX3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms