Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AP001094.4-201ENST00000579008 2176 ntBASIC18.13■□□□□ 0.49
SNX27Q96L92 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 RN7SL589P-201ENST00000481268 310 ntBASIC18.13■□□□□ 0.49
SNX27Q96L92 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNX27Q96L92 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX27Q96L92 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.13■□□□□ 0.49
SNX27Q96L92 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.13■□□□□ 0.49
SNX27Q96L92 AC004835.2-201ENST00000603762 682 ntBASIC18.13■□□□□ 0.49
SNX27Q96L92 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 Z92544.3-201ENST00000624747 417 ntBASIC18.13■□□□□ 0.49
SNX27Q96L92 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SNX27Q96L92 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNX27Q96L92 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.13■□□□□ 0.49
SNX27Q96L92 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SNX27Q96L92 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX27Q96L92 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX27Q96L92 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNX27Q96L92 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX27Q96L92 TFAMP1-201ENST00000412727 736 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 SPDYE11-202ENST00000450699 704 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SNX27Q96L92 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX27Q96L92 SPDYE9P-201ENST00000570642 692 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.12■□□□□ 0.49
SNX27Q96L92 SPDYE10P-202ENST00000612005 668 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 SPDYE8P-202ENST00000612377 668 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX27Q96L92 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX27Q96L92 AKAP8P1-201ENST00000434743 1349 ntBASIC18.12■□□□□ 0.49
SNX27Q96L92 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.12■□□□□ 0.49
SNX27Q96L92 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SNX27Q96L92 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX27Q96L92 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.11■□□□□ 0.49
SNX27Q96L92 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.11■□□□□ 0.49
SNX27Q96L92 AC243562.1-201ENST00000560672 389 ntBASIC18.11■□□□□ 0.49
SNX27Q96L92 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.11■□□□□ 0.49
SNX27Q96L92 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SNX27Q96L92 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX27Q96L92 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX27Q96L92 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
SNX27Q96L92 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX27Q96L92 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms