Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 PCDH8P1-201ENST00000428983 2773 ntBASIC17.17■□□□□ 0.34
RTP4Q96DX8 AL031731.1-201ENST00000642131 2094 ntBASIC17.17■□□□□ 0.34
RTP4Q96DX8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 AF186996.4-201ENST00000467186 377 ntBASIC17.17■□□□□ 0.34
RTP4Q96DX8 RPS15P9-201ENST00000494093 319 ntBASIC17.17■□□□□ 0.34
RTP4Q96DX8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTP4Q96DX8 AL353732.1-201ENST00000569618 1459 ntBASIC17.17■□□□□ 0.34
RTP4Q96DX8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RTP4Q96DX8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AL031284.1-201ENST00000419297 478 ntBASIC17.16■□□□□ 0.34
RTP4Q96DX8 PMS2P1-201ENST00000431037 1228 ntBASIC17.16■□□□□ 0.34
RTP4Q96DX8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AL671883.3-201ENST00000603274 991 ntBASIC17.16■□□□□ 0.34
RTP4Q96DX8 GGTLC5P-201ENST00000617623 998 ntBASIC17.16■□□□□ 0.34
RTP4Q96DX8 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 IL9RP2-201ENST00000423948 1312 ntBASIC17.16■□□□□ 0.34
RTP4Q96DX8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTP4Q96DX8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RTP4Q96DX8 AC005052.1-201ENST00000625181 2492 ntBASIC17.15■□□□□ 0.34
RTP4Q96DX8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTP4Q96DX8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 AC136632.2-201ENST00000512891 861 ntBASIC17.15■□□□□ 0.34
RTP4Q96DX8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.15■□□□□ 0.34
RTP4Q96DX8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms