Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.53■□□□□ 0.08
HPS1Q92902 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 AC005915.1-201ENST00000624912 2018 ntBASIC15.53■□□□□ 0.08
HPS1Q92902 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.53■□□□□ 0.08
HPS1Q92902 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
HPS1Q92902 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 KRT18P55-202ENST00000578578 1546 ntBASIC15.53■□□□□ 0.08
HPS1Q92902 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HPS1Q92902 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 AC133963.1-201ENST00000504166 1679 ntBASIC15.52■□□□□ 0.08
HPS1Q92902 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 CICP13-201ENST00000422015 2789 ntBASIC15.52■□□□□ 0.08
HPS1Q92902 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
HPS1Q92902 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
HPS1Q92902 HLA-F-220ENST00000434407 884 ntBASIC15.52■□□□□ 0.08
HPS1Q92902 PVRIG2P-201ENST00000435460 978 ntBASIC15.52■□□□□ 0.08
HPS1Q92902 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS1Q92902 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.52■□□□□ 0.08
HPS1Q92902 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.52■□□□□ 0.08
HPS1Q92902 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HPS1Q92902 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.52■□□□□ 0.08
HPS1Q92902 AC005786.4-201ENST00000623369 682 ntBASIC15.52■□□□□ 0.08
HPS1Q92902 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HPS1Q92902 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
HPS1Q92902 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HPS1Q92902 AL009178.2-201ENST00000597278 2719 ntBASIC15.52■□□□□ 0.07
HPS1Q92902 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.52■□□□□ 0.07
HPS1Q92902 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.52■□□□□ 0.07
HPS1Q92902 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
HPS1Q92902 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HPS1Q92902 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HPS1Q92902 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HPS1Q92902 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.51■□□□□ 0.07
HPS1Q92902 KRT8P26-201ENST00000534154 1276 ntBASIC15.51■□□□□ 0.07
HPS1Q92902 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.51■□□□□ 0.07
HPS1Q92902 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.51■□□□□ 0.07
HPS1Q92902 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.51■□□□□ 0.07
HPS1Q92902 AL136038.4-201ENST00000603606 1261 ntBASIC15.51■□□□□ 0.07
HPS1Q92902 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.51■□□□□ 0.07
HPS1Q92902 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HPS1Q92902 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms