Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD5Q8TDI0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 TSEN15P1-201ENST00000423257 515 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CNN2P11-201ENST00000429351 262 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PRYP6-201ENST00000514804 343 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AC105233.2-201ENST00000523697 349 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AF228730.5-201ENST00000530288 346 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 MIR3687-2-201ENST00000577708 61 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 MIR3687-1-201ENST00000614492 61 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 AP001059.3-201ENST00000619053 235 ntBASIC16.92■□□□□ 0.3
CHD5Q8TDI0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHD5Q8TDI0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC092171.3-201ENST00000610122 2651 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AP001160.2-201ENST00000596071 487 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 FAM220BP-201ENST00000377689 816 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC093724.1-201ENST00000448659 1027 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 MIR4469-201ENST00000583919 79 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 AC105339.1-204ENST00000636249 355 ntBASIC16.91■□□□□ 0.3
CHD5Q8TDI0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHD5Q8TDI0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHD5Q8TDI0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms