Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC025048.3-201ENST00000590609 569 ntBASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AL022328.1-201ENST00000610050 478 ntBASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC006033.1-201ENST00000440505 426 ntBASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ALMS1Q8TCU4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 RN7SL219P-201ENST00000582872 296 ntBASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ALMS1Q8TCU4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 SNX33P1-201ENST00000592116 1762 ntBASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 FTH1P14-201ENST00000482930 551 ntBASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AC004461.2-201ENST00000629517 803 ntBASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 COG4-212ENST00000564653 590 ntTSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.14□□□□□ -0.63
ALMS1Q8TCU4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC11.13□□□□□ -0.63
ALMS1Q8TCU4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms