Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AC005104.2-201ENST00000427818 678 ntBASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CFAP61Q8NHU2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AC060834.1-201ENST00000443027 2032 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 LINC00554-201ENST00000564841 3011 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TSPY19P-201ENST00000418461 509 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TSPY18P-201ENST00000441642 509 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AC002558.1-201ENST00000488906 803 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 LINC01711-201ENST00000598340 967 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 LYSMD4-203ENST00000378904 2122 ntBASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CFAP61Q8NHU2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CFAP61Q8NHU2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CFAP61Q8NHU2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CFAP61Q8NHU2 AC005052.1-201ENST00000625181 2492 ntBASIC17.14■□□□□ 0.34
CFAP61Q8NHU2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 AC099063.4-201ENST00000641099 1602 ntBASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CFAP61Q8NHU2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms