Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF248Q8NDW4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ZNF248Q8NDW4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZNF248Q8NDW4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZNF248Q8NDW4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 TREML5P-201ENST00000421694 576 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 FAM58DP-201ENST00000428076 619 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 CR383656.12-201ENST00000549567 513 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC243562.1-201ENST00000560672 389 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AL135744.1-201ENST00000565098 629 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC100803.2-201ENST00000562459 1963 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 AC067852.2-201ENST00000590513 2313 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF248Q8NDW4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AC007274.1-201ENST00000439805 662 ntBASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AL359881.2-201ENST00000602973 570 ntBASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AL158211.3-201ENST00000607385 239 ntBASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 AL161645.1-201ENST00000622716 1255 ntBASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
ZNF248Q8NDW4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms