Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 AC138894.3-201ENST00000603787 634 ntBASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CLDN22Q8N7P3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SPDYE21P-201ENST00000413323 827 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AC012615.1-201ENST00000565797 1299 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AP000867.4-201ENST00000641616 219 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AL139011.1-202ENST00000642063 584 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 AC132872.4-202ENST00000622924 2756 ntBASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDN22Q8N7P3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDN22Q8N7P3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms