Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 RCN1P2-201ENST00000398357 915 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
APLFQ8IW19 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC009533.2-201ENST00000543664 586 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC139887.3-201ENST00000568585 713 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.81■□□□□ 0.28
APLFQ8IW19 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC005336.2-201ENST00000593183 939 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.81■□□□□ 0.28
APLFQ8IW19 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 AC132872.4-202ENST00000622924 2756 ntBASIC16.81■□□□□ 0.28
APLFQ8IW19 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
APLFQ8IW19 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
APLFQ8IW19 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
APLFQ8IW19 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
APLFQ8IW19 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 AC243591.1-201ENST00000452967 1364 ntBASIC16.8■□□□□ 0.28
APLFQ8IW19 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 RPS2P28-201ENST00000314255 741 ntBASIC16.8■□□□□ 0.28
APLFQ8IW19 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.8■□□□□ 0.28
APLFQ8IW19 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 FGFR3P6-201ENST00000457012 610 ntBASIC16.8■□□□□ 0.28
APLFQ8IW19 AC068472.1-201ENST00000474589 881 ntBASIC16.8■□□□□ 0.28
APLFQ8IW19 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.8■□□□□ 0.28
APLFQ8IW19 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
APLFQ8IW19 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.8■□□□□ 0.28
APLFQ8IW19 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
APLFQ8IW19 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
APLFQ8IW19 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 AC099343.3-201ENST00000605834 2503 ntBASIC16.79■□□□□ 0.28
APLFQ8IW19 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.79■□□□□ 0.28
APLFQ8IW19 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
APLFQ8IW19 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.79■□□□□ 0.28
APLFQ8IW19 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.79■□□□□ 0.28
APLFQ8IW19 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
APLFQ8IW19 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
APLFQ8IW19 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.79■□□□□ 0.28
APLFQ8IW19 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APLFQ8IW19 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms