Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL3Q8IVW4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 AC006504.4-201ENST00000592118 1568 ntBASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL3Q8IVW4 AC002310.6-201ENST00000624451 1377 ntBASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AC107918.4-202ENST00000641623 219 ntBASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKL3Q8IVW4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AC073648.2-201ENST00000510116 352 ntBASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 TNRC18P3-201ENST00000441896 2691 ntBASIC17.32■□□□□ 0.36
CDKL3Q8IVW4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms