Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FRMD8P1-201ENST00000440433 1524 ntBASIC11.57□□□□□ -0.56
CSMD3Q7Z407 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AC092933.1-201ENST00000393644 945 ntBASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CYP2A7P1-201ENST00000595391 815 ntBASIC11.57□□□□□ -0.56
CSMD3Q7Z407 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CETN4P-206ENST00000642099 2168 ntBASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC093004.1-201ENST00000508850 424 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC044860.1-202ENST00000559481 777 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AP005482.1-201ENST00000563722 1273 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC105021.1-202ENST00000570572 669 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 NAT9-224ENST00000583757 583 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC007389.4-201ENST00000454674 793 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AC015936.2-201ENST00000593177 259 ntBASIC11.56□□□□□ -0.56
CSMD3Q7Z407 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CSMD3Q7Z407 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CSMD3Q7Z407 BICD1-207ENST00000551848 1962 ntBASIC11.55□□□□□ -0.56
CSMD3Q7Z407 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms