Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.96■□□□□ 0.46
CNKSR3Q6P9H4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CNKSR3Q6P9H4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CNKSR3Q6P9H4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CNKSR3Q6P9H4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 RN7SL752P-201ENST00000463779 287 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AC093004.1-201ENST00000508850 424 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AL138688.1-201ENST00000624851 1594 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TUBB7P-202ENST00000428444 1305 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNKSR3Q6P9H4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AL512384.1-201ENST00000406683 331 ntBASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AC011495.1-201ENST00000498085 584 ntBASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AC017083.2-201ENST00000608069 979 ntBASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNKSR3Q6P9H4 AC087289.5-201ENST00000586076 3175 ntBASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 SPDYE19P-201ENST00000338590 713 ntBASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 DOC2GP-202ENST00000514950 1163 ntBASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 AC013467.2-201ENST00000605472 835 ntBASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 AL162274.1-201ENST00000617191 1098 ntBASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CNKSR3Q6P9H4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CNKSR3Q6P9H4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms