Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 RPL37AP1-201ENST00000412502 279 ntBASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.42■□□□□ 0.22
LYSMD4Q5XG99 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RNF165-205ENST00000588679 2904 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SLC25A1P3-201ENST00000395415 828 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 U91328.1-201ENST00000437528 223 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 IGHV3-71-201ENST00000523324 359 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 API5-211ENST00000534695 560 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LYSMD4Q5XG99 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 AC135586.1-201ENST00000539323 574 ntBASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 AC105021.1-202ENST00000570572 669 ntBASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LYSMD4Q5XG99 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms