Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 AC004461.1-201ENST00000412461 403 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 ACTG1P14-201ENST00000446382 1122 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 MIR4515-201ENST00000584082 81 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 AC099522.2-201ENST00000607001 744 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 AC105339.1-204ENST00000636249 355 ntBASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PRAMEF17Q5VTA0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 SLC22A20-204ENST00000530038 1673 ntBASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 AL513210.1-201ENST00000629608 234 ntBASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 AL645728.2-201ENST00000641974 660 ntBASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
PRAMEF17Q5VTA0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 AC140658.5-201ENST00000438532 169 ntBASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 TIMM8BP1-201ENST00000452384 211 ntBASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PRAMEF17Q5VTA0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms