Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 AL591424.1-201ENST00000442569 1213 ntBASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 DUX4L17-201ENST00000557360 1267 ntBASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 AL391005.1-201ENST00000623953 2435 ntBASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LDLRAP1Q5SW96 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 TOP3BP1-201ENST00000420768 1380 ntBASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 OR7E47P-204ENST00000575924 449 ntBASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 AC027601.4-201ENST00000611259 610 ntBASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 OR6D1P-203ENST00000641209 4860 ntBASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LDLRAP1Q5SW96 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 KRT8P49-201ENST00000604166 1432 ntBASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 HCG4B-203ENST00000450128 991 ntBASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 REXO1L3P-201ENST00000622202 1288 ntBASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AL162727.3-201ENST00000635661 2787 ntBASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LDLRAP1Q5SW96 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms